[HTML][HTML] Culture impact on the transcriptomic programs of primary and iPSC-derived human alveolar type 2 cells

KD Alysandratos, C Garcia-de-Alba, C Yao, P Pessina… - JCI insight, 2023 - ncbi.nlm.nih.gov
JCI insight, 2023ncbi.nlm.nih.gov
Dysfunction of alveolar epithelial type 2 cells (AEC2s), the facultative progenitors of lung
alveoli, is implicated in pulmonary disease pathogenesis, highlighting the importance of
human in vitro models. However, AEC2-like cells in culture have yet to be directly compared
to their in vivo counterparts at single-cell resolution. Here, we performed head-to-head
comparisons among the transcriptomes of primary (1) adult human AEC2s, their cultured
progeny, and human induced pluripotent stem cell–derived AEC2s (iAEC2s). We found …
Abstract
Dysfunction of alveolar epithelial type 2 cells (AEC2s), the facultative progenitors of lung alveoli, is implicated in pulmonary disease pathogenesis, highlighting the importance of human in vitro models. However, AEC2-like cells in culture have yet to be directly compared to their in vivo counterparts at single-cell resolution. Here, we performed head-to-head comparisons among the transcriptomes of primary (1) adult human AEC2s, their cultured progeny, and human induced pluripotent stem cell–derived AEC2s (iAEC2s). We found each population occupied a distinct transcriptomic space with cultured AEC2s (1 and iAEC2s) exhibiting similarities to and differences from freshly purified 1 cells. Across each cell type, we found an inverse relationship between proliferative and maturation states, with preculture 1 AEC2s being most quiescent/mature and iAEC2s being most proliferative/least mature. Cultures of either type of human AEC2s did not generate detectable alveolar type 1 cells in these defined conditions; however, a subset of iAEC2s cocultured with fibroblasts acquired a transitional cell state described in mice and humans to arise during fibrosis or following injury. Hence, we provide direct comparisons of the transcriptomic programs of 1 and engineered AEC2s, 2 in vitro models that can be harnessed to study human lung health and disease.
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